Inpainting¶

Inpainting example

Synthesize healthy brain tissue in tumor-affected regions of brain MRI exams.

Single Subject¶

from brats import Inpainter
from brats.constants import InpaintingAlgorithms

inpainter = Inpainter(
    algorithm=InpaintingAlgorithms.BraTS25_1A,
    cuda_devices="0",
)
inpainter.infer_single(
    t1n="path/to/voided_t1n.nii.gz",
    mask="path/to/mask.nii.gz",
    output_file="inpainting.nii.gz",
)

Batch Processing¶

inpainter.infer_batch(
    data_folder="path/to/subjects/",
    output_folder="path/to/output/",
)

Available Algorithms¶

Year	Rank	Author	Paper	Key Enum
2025	1st	Juexin Zhang, et al.	N/A	`BraTS25_1A`
2025	1st	André Ferreira, et al.	N/A	`BraTS25_1B`
2025	2nd	Juhyung Ha, et al.	N/A	`BraTS25_2`
2024	1st	Juexin Zhang et al.	Link	`BraTS24_1`
2024	2nd	André Ferreira, et al.	Link	`BraTS24_2`
2024	3rd	Alicia Durrer, et al.	N/A	`BraTS24_3`
2023	1st	Juexin Zhang, et al.	Link	`BraTS23_1`
2023	2nd	Alicia Durrer, et al.	Link	`BraTS23_2`
2023	3rd	Jiayu Huo, et al.	Link	`BraTS23_3`